Taddei L, Chukhutsina VU, Lepetit B, Stella GR, Bassi R, van Amerongen H, Bouly JP, Jaubert M, Finazzi G, Falciatore A (2018). Dynamic Changes between Two LHCX-Related Energy Quenching Sites Control Diatom Photoacclimation. Plant Physiol. 2018177(3):953-965. https://doi.org/10.1104/pp.18.00448
Jaubert M, Bouly J.P, Ribera d’Alcalà M, Falciatore A (2017). Light sensing and responses in marine microalgae. Curr Opin Plant Biol. 37:70-77. https://doi.org/10.1016/j.pbi.2017.03.005
Fortunato AE, Jaubert M, Enomoto G, Bouly J.P, Raniello R, Thaler M, Malviya S, Bernardes JS, Rappaport F, Gentili B, Huysman MJJ, Carbone A, Bowler C, d’Alcalà M Ribera, Ikeuchi M, Falciatore A. (2016) Diatom Phytochromes Reveal the Existence of Far-Red-Light-Based Sensing in the Ocean. The Plant Cell 28(3), pp.616 – 628. https://doi.org/10.1105/tpc.15.00928
Gherardi M, Amato A, Bouly J.P, Cheminant Navarro S, Ferrante M Immacolata, d’Alcalá M Ribera, Ludicone D, Falciatore A, Cosentino Lagomarsino M. (2016) Regulation of chain length in two diatoms as a growth-fragmentation process. Phys. Rev. E 94, pp.022418 https://doi.org/10.1103/PhysRevE.94.022418
Taddei L, Stella GRocco, Rogato A, Bailleul B, Fortunato AE, Annunziata R, Sanges R, Thaler M, Lepetit B, Lavaud J, Jaubert M, Finazzi G, Bouly J-P, Falciatore A. (2016) Multi-signal control of expression of the LHCX protein family in marine diatom Phaeodactylum tricornutum Journal Experimental Botany 67(13), pp.3939-51. https://doi.org/10.1093/jxb/erw198
Tang Q, Guittard-Crilat E, Maldiney R, Habricot Y, Miginiac E, Bouly JP, Lebreton S (2016). The mitogen-activated protein kinase phosphatase PHS1 regulates flowering in Arabidopsis thaliana. Planta;243(4):909-23. https://doi.org/10.1007/s00425-015-2447-5
Fortunato A.E., Annunziata R., Jaubert M., Bouly J.P., Falciatore A. (2015) Dealing with light: The widespread and multitasking cryptochrome/photolyase family in photosynthetic organisms. J Plant Physiol.;172C:42-54. https://doi.org/10.1016/j.jplph.2014.06.011
Müller P., Bouly J.P. (2015) Searching for the mechanism of signalling by plant photoreceptor cryptochrome. FEBS Lett. 589(2):189-92. https://doi.org/10.1016/j.febslet.2014.12.008
Müller P., Bouly J.P., Hitomi K., Balland V., Getzoff E.D., Ritz T., Brettel K. (2014) ATP binding turns plant cryptochrome into an efficient natural photoswitch. Sci Rep. 4:5175. https://doi.org/10.1038/srep05175
Burney S., Wenzel R., Kottke T., Roussel T., Hoang N., Bouly J.P., Bittl R., Heberle J., Ahmad M. (2012) Single Amino Acid Substitution Reveals Latent Photolyase Activity in Arabidopsis cry1. Angew Chem Int. 51(37):9356-9360. https://doi.org/10.1002/anie.201203476
Jossier M., Bouly J.P., Meimoun P., Arjmand A., Lessard P., Hawkins S., Grahame Hardie D., Thomas M. (2009) SnRK1 (SNF1-Related Kinase 1) has a central role in sugar and ABA signalling in Arabidopsis thaliana. Plant Journal. 59(2):316-328. https://doi.org/10.1111/j.1365-313X.2009.03871.x
Burney S., Hoang N., Caruso M., Dudkin E.A., Ahmad M., Bouly J.P. (2009) Conformational change induced by ATP binding correlates with enhanced biological function of Arabidopsis cryptochrome. FEBS Lett. 583(9):1427-1433. https://doi.org/10.1016/j.febslet.2009.03.040
Hoang N., Schleicher E., Kacprzak S., Bouly J.P., Picot M., Wu W., Berndt A., Wolf E., Bittl R., Ahmad, M. (2008) Human and drosophila cryptochromes are light activated by flavin photoreduction in living cells. PLoS biology. 6(7):e160. https://doi.org/10.1371/journal.pbio.0060160
Hoang N., Bouly J.P., Ahmad M. (2008) Evidence of a light-sensing role for folate in Arabidopsis cryptochrome blue-light receptors. Molecular Plant 1(1) : 68-74. https://doi.org/10.1093/mp/ssm008
Bouly J.P., Schleicher E, Dionisio-Sese M, Vandenbussche F, Van Der Straeten D, Bakrim N, Meier S, Batshauer A, Galland P, Bittl R, Ahmad M. (2007). Cryptochrome blue light photoreceptors are activated through interconversion of flavin redox states. J. Biol. Chem. 282(13) : 9383-9391. https://doi.org/10.1074/jbc.M609842200
Gissot L., Polge C., Jossier M., Girin T., Bouly J.P., Kreis M., Thomas M. (2006). AKIN{beta}{gamma} Contributes to SnRK1 Heterotrimeric Complexes and Interacts with Two Proteins Implicated in Plant Pathogen Resistance Through Its KIS/GBD. Plant Physiol. 42(3) : 931-944. https://doi.org/10.1104/pp.106.087718
Canamero R.C., Bakrim N., Bouly J.P, Garay A., Dudkin E.E., Habricot Y., Ahmad M. (2006). Cryptochrome photoreceptors cry1 and cry2 antagonistically regulate primary root elongation in Arabidopsis thaliana. Planta. 224(5) : 995-1003. https://doi.org/10.1007/s00425-006-0280-6
Zeugner A., Byrdin M., Bouly J.P., Bakrim N., Giovani B., Brettel K., Ahmad M. (2005). Light-induced electron transfer in Arabidopsis cryptochrome-1 correlates with in-vivo function. J. Biol. Chem. 280(20) : 19437-19440. https://doi.org/10.1074/jbc.C500077200
Gissot L., Polge C., Bouly J.P., Lemaitre T., Kreis M., Thomas M. (2004). AKINbeta3, a plant specific SnRK1 protein, is lacking domains present in yeast and mammals non-catalytic beta-subunits. Plant Mol Biol. 56(5) : 747-759.
Bouly J.P., Giovani B., Djamei A., Mueller M., Zeugner A., Dudkin E.A., Batschauer A., Ahmad M. (2003). Novel ATP-binding and autophosphorylation activity associated with Arabidopsis and human cryptochrome-1. Eur. J. Biochem. 270 (14) : 2921-2928
Halford NG, Bouly J.P.,Thomas M. (2000). SNF1-related protein kinases (SnRKs)—regulators at the heart of the control of carbon metabolism and partitioning. Advances in Botanical Research Incorporating Advances in Plant Pathology 32: 405–434.
Bouly J.P., Gissot L., Lessard P., Kreis M., Thomas M. (1999). Characterization of Arabidopsis thaliana homologues to yeast SIP and SNF4 proteins interacting with AKINa1, a SNF1-like protein kinase. Plant Journal. 18 : 541-550.
Lessard P., Bouly J.P., Jouannic S., Petit-Jean X., Kreis M., Thomas M. (1999). Identification of cdc2cAt: a new cyclin dependent kinase expressed in Arabidopsis thaliana flowers. Biochimica Biophysica Acta. 1445 : 351-358. https://doi.org/10.1016/s0167-4781(99)00059-7
Segalat L., Perichon R., Bouly J.P., Lepesant J.A. (1992). The Drosophila melanogaster pourquoi pas? wings down zinc finger protein : oocyste-nucleus localization and embryonic requirement. Genes and Development. 6 : 1019-1029. https://doi.org/10.1101/gad.6.6.1019
