Taddei L, Chukhutsina V, Lepetit B, Stella GR, Bassi R, van Amerongen H, Bouly J-P, Jaubert M, Finazzi G, Falciatore A. (2018) Dynamic changes between two LHCX-related energy quenching sites control diatom photoacclimation. Plant Physiology.
Moejes FWanjiku, Matuszynska A, Adhikari K, Bassi R, Cariti F, Cogne G, Dikaios I, Falciatore A, Finazzi G, Flori S, Goldschmidt-Clermont M, Magni S, Maguire J, Le Monnier A, Müller K, Poolman M, Singh D, Spelberg S, Stella GRocco, Succurro A, Taddei L, Urbain B, Villanova V, Zabke C, Ebenhöh O. (2017) A systems-wide understanding of photosynthetic acclimation in algae and higher plants. J Exp Bot. 68(11), pp.2667-2681.
Kirkham AR, Richthammer P, Schmidt K, Wustmann M, Maeda Y, Hedrich R, Brunner E, Tanaka T, van Pée K-H, Falciatore A, Mock T. (2017) A role for the cell-wall protein silacidin in cell size of the diatom Thalassiosira pseudonana. ISME J. 11(11), pp.2452-2464.
Villanova V, Fortunato AE, Singh D, Dal Bo D, Conte M, Obata T, Jouhet J, Fernie AR, Marechal E, Falciatore A, Pagliardini J, Le Monnier A, Poolman M, Curien G, Petroutsos D, Finazzi G. (2017) Investigating mixotrophic metabolism in the model diatom Phaeodactylum tricornutum. Philos Trans R Soc Lond B Biol Sci. 372(1728).
Jaubert M, Bouly J-P, d’Alcalà M Ribera, Falciatore A. (2017) Light sensing and responses in marine microalgae. Curr Opin Plant Biol. 37, pp.70-77.
Mock T, Otillar RP, Strauss J, McMullan M, Paajanen P, Schmutz J, Salamov A, Sanges R, Toseland A, Ward BJ, Allen AE, Dupont CL, Frickenhaus S, Maumus F, Veluchamy A, Wu T, Barry KW, Falciatore A, Ferrante MI, Fortunato AE, Glöckner G, Gruber A, Hipkin R, Janech MG, Kroth PG, Leese F, Lindquist EA, Lyon BR, Martin J, Mayer C, Parker M, Quesneville H, Raymond JA, Uhlig C, Valas RE, Valentin KU, Worden AZ, E Armbrust V, Clark MD, Bowler C, Green BR, Moulton V, van Oosterhout C, Grigoriev IV (2017) Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus. Nature. 541(7638), pp.536-540.
Lepetit B, Gelin G, Lepetit M, Sturm S, Vugrinec S, Rogato A, Peter K, Falciatore A, Lavaud J. The diatom Phaeodactylum tricornutum adjusts NPQ capacity in response to dynamic light via fine-tuned Lhcx and xanthophyll cycle pigment synthesis. New Phytologist. 214(1), pp.1469-8137 (2017).
Gherardi M, Amato A, Bouly J-P, Cheminant Navarro S, Ferrante MI, Riberà d’Alcalà M, Iudicone D, Falciatore A, Cosentino Lagomarsino M. Regulation of chain length in two diatoms as a growth-fragmentation process. Phys. Rev. E. 94, pp.022418 (2016).
Taddei L, Stella GR, Rogato A, Bailleul B, Fortunato AE, Annunziata R, Sanges R, Thaler M, Lepetit B, Lavaud J, Jaubert M, Finazzi G, Bouly J-P, Falciatore A. Multisignal control of expression of the LHCX protein family in marine diatom Phaeodactylum tricornutum. Journal Experimental Botany. 67(13), pp.3939-51 (2016).
Fortunato AE, Jaubert M, Enomoto G, Bouly J-P, Raniello R, Thaler M, Malviya S, Bernardes JS, Rappaport F, Gentili B, Huysman MJJ, Carbone A, Bowler C, Riberà d’Alcalà M, Ikeuchi M, Falciatore A. Diatom Phytochromes Reveal the Existence of Far-Red-Light-Based Sensing in the Ocean. The Plant Cell. 28(3), pp.616 – 628 (2016).
Tang Q, Guittard-Crilat E, Maldiney R, Habricot Y, Miginiac E, Bouly J-P, Lebreton S. The mitogen-activated protein kinase phosphatase PHS1 regulates flowering in Arabidopsis thaliana. Planta. (2015).
Russo MTeresa, Annunziata R, Sanges R, Ferrante MI, Falciatore A. The upstream regulatory sequence of the light harvesting complex Lhcf2 gene of the marine diatom <i>Phaeodactylum tricornutum</i> enhances transcription in an orientation- and distance-independent fashion. Mar Genomics. 24 Pt 1, pp.69-79 (2015).
Kadono T, Miyagawa-Yamaguchi A, Kira N, Tomaru Y, Okami T, Yoshimatsu T, Hou L, Ohama T, Fukunaga K, Okauchi M, Yamaguchi H, Ohnishi K, Falciatore A, Adachi M. Characterization of marine diatom-infecting virus promoters in the model diatom <i>Phaeodactylum tricornutum</i>. Scientific Reports. 5, pp.18708 – (2015).
Fortunato AE, Annunziata R, Jaubert M, Bouly J-P, Falciatore A. Dealing with light: The widespread and multitasking cryptochrome/photolyase family in photosynthetic organisms. J Plant Physiol. 172, pp.42-54 (2015).
Oliveri P, Fortunato AE, Petrone L, Ishikawa-Fujiwara T, Kobayashi Y, Todo T, Antonova O, Arboleda E, Zantke J, Tessmar-Raible K, Falciatore A. The Cryptochrome/Photolyase Family in aquatic organisms. Mar Genomics. 14, pp.23-37 (2014).
Daboussi F, Leduc S, Maréchal A, Dubois G, Guyot V, Perez-Michaut C, Amato A, Falciatore A, Juillerat A, Beurdeley M, Voytas DF, Cavarec L, Duchateau P. Genome engineering empowers the diatom Phaeodactylum tricornutum for biotechnology. Nat Commun. 5, pp.3831 (2014).
Raible F, Falciatore A. It’s about time: rhythms as a new dimension of molecular marine research. Mar Genomics. 14, pp.1-2 (2014).
Rogato A, Richard H, Sarazin A, Voss B, Cheminant Navarro S, Champeimont R, Navarro L, Carbone A, Hess WR, Falciatore A. The diversity of small non-coding RNAs in the diatom Phaeodactylum tricornutum. BMC Genomics. 15, pp.698 (2014).
Bowler C, Falciatore A. The molecular life of diatoms. Mar Genomics. (2014).
Lepetit B, Sturm S, Rogato A, Gruber A, Sachse M, Falciatore A, Kroth PG, Lavaud J. High light acclimation in the secondary plastids containing diatom Phaeodactylum tricornutum is triggered by the redox state of the plastoquinone pool. Plant Physiol. 161(2), pp.853-65 (2013).
Huysman MJJ, Fortunato AE, Matthijs M, Costa BSchellenbe, Vanderhaeghen R, Van den Daele H, Sachse M, Inzé D, Bowler C, Kroth PG, Wilhelm C, Falciatore A, Vyverman W, De Veylder L. AUREOCHROME1a-mediated induction of the diatom-specific cyclin dsCYC2 controls the onset of cell division in diatoms (Phaeodactylum tricornutum). Plant Cell. 25(1), pp.215-28 (2013).
Depauw F Angelique, Rogato A, Riberà d’Alcalà M, Falciatore A. Exploring the molecular basis of responses to light in marine diatoms. J Exp Bot. 63(4), pp.1575-91 (2012).
Bowler C, De Martino A, Falciatore A. Diatom cell division in an environmental context. Curr Opin Plant Biol. 13(6), pp.623-30 (2010).
Bailleul B, Rogato A, De Martino A, Coesel S, Cardol P, Bowler C, Falciatore A, Finazzi G. An atypical member of the light-harvesting complex stress-related protein family modulates diatom responses to light. Proc Natl Acad Sci U S A. 107(42), pp.18214-9 (2010).
Heijde M, Zabulon G, Corellou F, Ishikawa T, Brazard J, Usman A, Sanchez F, Plaza P, Martin M, Falciatore A, Todo T, Bouget F-Y, Bowler C. Characterization of two members of the cryptochrome/photolyase family from Ostreococcus tauri provides insights into the origin and evolution of cryptochromes. Plant Cell Environ. 33(10), pp.1614-26 (2010).
Coesel S, Mangogna M, Ishikawa T, Heijde M, Rogato A, Finazzi G, Todo T, Bowler C, Falciatore A. Diatom PtCPF1 is a new cryptochrome/photolyase family member with DNA repair and transcription regulation activity. EMBO Rep. 10(6), pp.655-61 (2009).
Coesel S, Mangogna M, Ishikawa T, Heijde M, Rogato A, Finazzi G, Todo T, Bowler C, Falciatore A Diatom PtCPF1 is a new cryptochrome/photolyase family member with DNA repair and transcription regulation activity. EMBO Rep. 10(6), pp.655-61 (2009).
Coesel S, Obornik M, Varela J, Falciatore A, Bowler C Evolutionary Origins and Functions of the Carotenoid Biosynthetic Pathway in Marine Diatoms. Randau L (Eds.). PLoS ONE. 3(8), pp.e2896 (2008).
Bowler C, Allen AE, Badger JH, Grimwood J, Jabbari K, Kuo A, Maheswari U, Martens C, Maumus F, Otillar RP, Rayko E, Salamov A, Vandepoele K, Beszteri B, Gruber A, Heijde M, Katinka M, Mock T, Valentin K, Verret F, Berges JA, Brownlee C, Cadoret J-P, Chiovitti A, Choi CJae, Coesel S, De Martino A, J Detter C, Durkin C, Falciatore A, Fournet J, Haruta M, Huysman MJJ, Jenkins BD, Jiroutova K, Jorgensen RE, Joubert Y, Kaplan A, Kröger N, Kroth PG, La Roche J, Lindquist E, Lommer M, Martin-Jézéquel V, Lopez PJ, Lucas S, Mangogna M, McGinnis K, Medlin LK, Montsant A, Le Secq M-POudot-, Napoli C, Obornik M, Parker MSchnitzler, Petit J-L, Porcel BM, Poulsen N, Robison M, Rychlewski L, Rynearson TA, Schmutz J, Shapiro H, Siaut M, Stanley M, Sussman MR, Taylor AR, Vardi A, von Dassow P, Vyverman W, Willis A, Wyrwicz LS, Rokhsar DS, Weissenbach J, E Armbrust V, Green BR, Van de Peer Y, Grigoriev IV
The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature. 456(7219), pp.239-44 (2008).
Montsant A, Allen AE, Coesel S, De Martino A, Falciatore A, Mangogna M, Siaut M, Heijde M, Jabbari K, Maheswari U, Rayko E, Vardi A, Apt KE, Berges JA, Chiovitti A, Davis AK, Thamatrakoln K, Hadi MZ, Lane TW, J. Lippmeier C, Martinez D, Parker MS, Pazour GJ, Saito MA, Rokhsar DS, E. Armbrust V, Bowler C Identification and comparative genomic analysis of signaling and regulatory components in the diatom Thalassiosira pseudonana. Journal of Phycology. 43, pp.585–604 (2007).
Siaut M, Heijde M, Mangogna M, Montsant A, Coesel S, Allen A, Manfredonia A, Falciatore A, Bowler C Molecular toolbox for studying diatom biology in Phaeodactylum tricornutum. Gene. 406(1-2), pp.23-35 (2007).
Falciatore A, Merendino L, Barneche F, Ceol M, Meskauskiene R, Apel K, Rochaix J-D The FLP proteins act as regulators of chlorophyll synthesis in response to light and plastid signals in Chlamydomonas. Genes Dev. 19(1), pp.176-87 (2005).
Falciatore A, Bowler C The evolution and function of blue and red light photoreceptors. Curr Top Dev Biol. 68, pp.317-50 (2005).
Merendino L, Falciatore A, Rochaix J-D Expression and RNA binding properties of the chloroplast ribosomal protein S1 from Chlamydomonas reinhardtii. Plant Mol Biol. 53(3), pp.371-82 (2003).
Falciatore A, Formiggini F, Bowler C Reporter genes for plant cells. in Molecular Plant Biology: A Pratical Approach. 2, pp. 265 – 283 (2002)
Scala S, Carels N, Falciatore A, Chiusano MLuisa, Bowler C Genome properties of the diatom Phaeodactylum tricornutum. Plant Physiol. 129(3), pp.993-1002 (2002).
Falciatore A, Bowler C Revealing the molecular secrets of marine diatoms. Annu Rev Plant Biol. 53, pp.109-30 (2002).
Falciatore A, Riberà d’Alcalà M, Croot P, Bowler C Perception of environmental signals by a marine diatom. Science. 288(5475), pp.2363-6 (2000).
Leblanc C, Falciatore A, Watanabe M, Bowler C Semi-quantitative RT-PCR analysis of photoregulated gene expression in marine diatoms. Plant Mol Biol. 40(6), pp.1031-44 (1999).
Falciatore A, Casotti R, Leblanc C, Abrescia C, Bowler C Transformation of Nonselectable Reporter Genes in Marine Diatoms. Mar Biotechnol (NY). 1(3), pp.239-251 (1999).
Limauro D, Falciatore A, Basso AL, Forlani G, De Felice M Proline biosynthesis in Streptococcus thermophilus: characterization of the proBA operon and its products. Microbiology. 142 ( Pt 11), pp.3275-82 (1996).