UMR8261 Expression Génétique Microbienne

CNRS / Université Paris Diderot Paris 7

Directeur : Harald Putzer, Directeur-adjoint : Ciarán Condon


LISTE GENERALE DES PUBLICATIONS

 

Articles dans des revues à comité de lecture / Peer-reviewed publications

2007 - 2008 - 2009 - 2010 - 2011 - 2012 - 2013 - 2014 - 2015 - 2016 -2017

    2017

  1. Aalberts D. P.*, Boël G*, & Hunt, J. F*. (2017) Codon Clarity or Conundrum? Cell Systems 4, 16–19.*Corresponding author

  2. Beusch, I., Barraud, P.*,¶, Moursy, A., Cléry, A. & Allain, F.H.¶ (2017) Tandem hnRNP A1 RNA recognition motifs act in concert to repress the splicing of survival motor neuron exon 7. eLife, 6:e25736. *Co-first authors ¶Co-corresponding authors.

  3. Braun, F., Durand S. & Condon, C. (2017) Initiating ribosomes and a 5'/3'-UTR interaction control ribonuclease action to tightly couple B. subtilis hbs mRNA stability with translation Nucleic Acids Res. 45, 11386-11400.

  4. Durand, S., Braun, F., Helfer, A-C., Romby, P. &Condon, C. (2017) sRNA-mediated activation of gene expression by inhibition of 5'-3’ exonucleolytic mRNA degradation. eLife.

  5. Galinier, A. & Deutscher, J. (2017) Sophisticated regulation of transciptional factors by the bacterial phosphoenolpyruvate:glycose phosphotransferase system. J. Mol. Biol., 429:773-789.

  6. Guyon,H., Mavré,F.,Catala, M., Turcaud, S., Brachet,F., Limoges, B.*, Tisné, C.* & Micouin, L.* (2017) Use of Redox Probe for Electrochemical RNA-ligand Binding Assay in Microliter Droplets. Chem Comm, 53, 1140-1143. *Co-corresponding authors.

  7. Homburg, C., Bommer, M., Wuttge, S., Hobe, C., Beck, S., Dobbek, H., Deutscher, J., Licht, A. & Schneider, E. (2017) Inducer exclusion in Firmicutes: Insights into the regulation of a carbohydrate ATP binding cassette transporter from Lactobacillus casei BL23 by the signal transducing protein P-Ser46-HPr. Mol. Microbiol., doi: 10.1111/mmi.13680 [Epub ahead of print].

  8. Jagodnik,  J., Brosse, A., Le Lam, T.N., Chiaruttini, C., Guillier, M. (2016) Mechanistic study of base-pairing small regulatory RNAs in bacteria. Methods 117: 67-76, doi: 10.1016/j.ymeth.2016.09.012..

  9. Jagodnik, J., Chiaruttini, C. & Guillier, M. (2017) Stem-loop structures within mRNA coding sequences activate translation initiation and mediate control by small regulatory RNAs. Molecular Cell 68(1): 158-170.

  10. Joyet, P., Mokhtari, A., Riboulet-Bisson, E., Blancato, V. S., Espariz, M., Magni, C., Hartke, A.*, Deutscher, J.* & Sauvageot, N. (2017) The enzymes catalyzing the catabolism of maltodextrins in Enterococcus faecalis. Appl. Env. Microbiol., doi: 10.1128/AEM00038-17. *Corresponding authors

  11. Hamouche L., Laalami S., Daerr A., Song S., Holland I.B., Séror S.J., Hamze K. & Putzer H. (2017) Bacillus subtilis swarmer cells lead, multiply and generate a trail of ‘quiescent’ descendants. MBio 8, e02102-16.

  12. Le Lam, T.N., Morvan, C., Liu, W., Bohn, C., Jaszczyszyn, Y. & Bouloc, P., (2017) Finding sRNA-associated phenotypes by competition assays : An example with Staphylococcus aureus. Methods 117, 21-27.

  13. Leroy,* M., Piton*, J., Gilet, L., Pellegrini, O., L., Proux, C., Coppée, J-Y., Figaro, S. & Condon, C. (2017) Rae1 (YacP), a new endoribonuclease involved in ribosome-dependent mRNA decay in B. subtilis. EMBO. J. 36, 1167-1181 https://doi.org/10.15252/embj.201796540. *Co-first authors.

  14. Ma, M., Li de la Sierra-Gallay, I., Lazar, N., Pellegrini, O, Durand, D., Marchfelder, A., Condon, C. & van Tilbeurgh, H. (2017) The crystal structure Trz1, the long form tRNase Z from yeast. Nucleic Acids Res. https://doi.org/10.1093/nar/gkx216

  15. Ma, M., Li de la Sierra-Gallay, I., Lazar, N., Pellegrini, O., Lepault, J. Condon, C., Durand, D. & van Tilbeurgh, H. (2017) Trz1, the long form RNase Z from yeast, forms a stable heterohexamer with endonuclease Nuc1 and mutarotase. Biochemistry. 474, 3599–3613

  16. Maes, A., Gracia, C., Innocenti, N., Zang, K., Aurell, E.  & Hajnsdorf, E.(2016) Landscape of RNA polyadenylation in E. coli. Nucleic Acids Res. 45, 2746-2756

  17. Oerum, S., Dégut, C., Barraud, P. & Tisné, C.* (2017) m1A post-transcriptional modification in tRNAs. Biomolecules, 2017 Feb 21;7(1). pii: E20. doi: 10.3390/biom7010020..

  18. Samatanga, B., Cléry, A.,Barraud, P., Allain, F. H. & Jelesarov, I. (2017) Comparative analyses of the thermodynamic RNA binding signatures of different types of RNA recognition motifs. Nucleic Acids Res. 45, 6037–6050.

  19. Sauvageot, N., Mokhtari, A., Joyet, P., Budin-Verneuil, A., Blancato, V.S., Repizo, G., Henry, C., Pikis, A., Thompson, J., Magni, C., Hartke, A.* & Deutscher, J.* (2017) Enterococcus faecalis uses a PTS permease and a host colonization-related ABC transporter for maltodextrin uptake. J. Bacteriol., 199:e00878-16 (2017). *Corresponding authors

  20. Sevaille, L., Gavara, L., Bebrone, C., De Luca, F., Nauton, L., Achard, M., Mercuri, P., Lonjon, P., Guyon, C., Turan-Zitouni, G., Dzieciolowski, J., Becker, K., Bénard, L., Condon, C., Maillard, L., Martinez, J., Frère, J-M., Dideberg, O., Galleni, M., Docquier, J-D. & J-F. Hernandez (2017) 1,2,4-Triazole-3-thione compounds as inhibitors of di-zinc metallo-β-lactamases. ChemMedChem. 12, 972-985.

  21. 2016

  22. Álvarez-Añorve, L., Gaugué, I., Link, H., Marcos-Viquez, J., Díaz-Jiménez ,D.M., Zonszein, S., Bustos-Jaimes, I., Schmitz-Afonso, I., Calcagno, M.L., Plumbridge, J.(2016) "Allosteric Activation of Escherichia coli Glucosamine-6-Phosphate Deaminase (NagB) In Vivo Justified by Intracellular Amino Sugar Metabolite Concentrations." J. Bacteriol. ;198(11):1610-20. doi: 10.1128/JB.00870-15. Print 2016 Jun 1.

  23. Antunes, A., Derkaoui, M., Terrade, A., Denizon, M., Deghmane, A.-E., Deutscher, J., Delany, I. & Taha, M.-K.* (2016) The phosphocarrier protein HPr contributes to meningococcal survival during infection. PLoS ONE, 11:e0162434. doi: 10.1371/journal.pone.0162434.

  24. Boël, G., Letso R. Neely H., Price W.N., Wong K-H., Su M., Luff J., Valecha M., Everett J., Acton T, Xiao R., Montelione G.T., Aalberts D.P., and Hunt J.F. (2016) Codon influence on protein expression in E. coli correlates with mRNA level. Nature 529, 358-363

  25. Brosse, A., Korobeinikova, A., Gottesman, S. & Guillier, M. (2016) Unexpected properties of sRNA promoters allow feedback control via regulation of a two-component system. Nucleic Acids Res. 44, 9650-9666.

  26. Derkaoui, M., Antunes, A., Nait-Abdallah, J., Poncet, S., Mazé, A., Ma Pham, Q.M., Mokhtari, A., Joyet, P., Deghmane, A.-E., Taha, M.-K.,* & Deutscher, J.* (2016) Transport and catabolism of carbohydrates by Neisseria meningitidis. J. Mol. Microbiol. Biotechnol., 26:320-332. *Corresponding authors

  27. Derkaoui, M., Antunes, A., Poncet, S., Nait-Abdallah, J., Joyet, P., Mazé, A., Henry, C., Taha, M.-K. & Deutscher, J.* & A.-E. Deghmane* (2016) The phosphocarrier protein HPr of Neisseria meningitidis interacts with the transcription regulator CrgA and its deletion affects capsule production, cell adhesion and virulence. Mol. Microbiol., 100:788-807

  28. DiChiara, J.M., Figaro, S., Liu, B., Condon, C. & Bechhofer, D.H. (2016) Mapping of internal monophosphate 5’ ends of Bacillus subtilis messenger RNAs and ribosomal RNAs in wild-type and ribonuclease-mutant strains. Nucleic Acids Res. 44, 3373-3389. doi: 10.1093/nar/gkw073.

  29. Fontaine, F., Gasiorowski, E., Gracia, C., Ballouche, M., Caillet, J., Marchais, A. & Hajnsdorf, E. (2016) The small RNA SraG participates in PNPase homeostasis. RNA 22, 1560–1573.

  30. Kentache, T., Milohanic, E.*, Cao, T. N., Mokhtari, A., Aké, F.M.D., Ma Pham Q.M., Joyet, P. & Deutscher, J.* (2016) Transport and catabolism of pentitols by Listeria monocytogenes. J. Mol. Microbiol. Biotechnol., 26:369-380. *Corresponding authors

  31. Le Pen, J., Maillet, L., Sarosiek, K., Vuillier, C., Gautier, F., Montessuit, S., Martinou, J.-C., Letai, A., Braun, F. & Juin, Ph. (2016) Constitutive p53 heightens mitochondrial apoptotic priming and favors cell death induction by BH3 mimetic inhibitors of BCL-xL. CDDIS 7, e2083; doi:10.1038/cddis.2015.400

  32. Muranaka, LS., Rütgers, M., Bujaldon, S., Heublein, A., Geimer, S., Wollman, F.A. & Schroda, M. (2016) TEF30 Interacts with Photosystem II Monomers and Is Involved in the Repair of Photodamaged Photosystem II in Chlamydomonas reinhardtii. Plant Physiol. 170, 821-40.

  33. Pécot, J., Maillet, L., Le Pen, J., Vuillier, C., de Carné Trécesson, S., Fétiveau, A., Sarosiek, K., Bock, F. J., Braun, F., Letai, A., Tait, S.W.G., Gautier, F. & Juin, Ph. (2016) Tight sequestration of BH3 proteins by BCL-xL at subcellular membranes contributes to apoptotic resistance. Cell reports 17, 3347–3358.

  34. Ruiz-Larrabeiti, O., Hernández, A., Gracia, C., Sevillano, E., Gallego, L., Hajnsdorf, E. & Kaberdin, V. (2016) A new custom microarray for sRNA profiling in Escherichia coli. FEMS Microbiology Letters 363, (13), doi 10.1093/femsle/fnw131. Editor's choice

    2015

  35. Banroques, J., & Tanner N. K. (2015) Bioinformatics and Biochemical Methods to Study the Structural and Functional Elements of DEAD-Box RNA Helicases. Methods Mol Biol 1259, 165-181.

  36. Bizebard, T., & Dreyfus, M. (2015)A FRET-based, continuous assay for the helicase activity of DEAD-box proteins. Methods Mol. Biol. 1259, 165-181.

  37. Bréchemier-Baey, D., Dominguez-Ramirez, L., Oberto, J. & Plumbridge, J. (2015) Operator recognition by the ROK transcription factor family members, NagC and Mlc. Nucleic Acids Res. 43, 361-372.

  38. Bréchemier-Baey, D., Pennetier, C. & Plumbridge J. (2015) Dual Inducer recognition by an Mlc homologue. Microbiology 161, 1694-1706.

  39. Celik, A, Kervestin, S, & Jacobson A. (2015) NMD : at the crossroads between translation termination and ribosome recycling. Biochimie 114, 2-9.

  40. Durand, S., Braun, F., Lioliou, E., Romilly, C., Helfer, A-C., Kuhn, L., Quittot, N., Nicolas, P., Romby, P.* & C. Condon*(2015) A nitric oxide regulated small RNA controls expression of genes involved in redox homeostasis in Bacillus subtilis. PLoS Genetics. *Co-corresponding authors. DOI:10.1371/journal.pgen.1004957

  41. Durand, S., Tomasini, A., Braun, F., Condon, C.*, and P. Romby*(2015)sRNA and mRNA turnover in Gram-positive bacteria. FEMS Micro Reviews 39, 316-330. *Co-corresponding authors

  42. Gilet, L, DiChiara, J. M., Figaro, S., Bechhofer, D. H. & Condon, C. (2015) Small stable RNA maturation and turnover in Bacillus subtilis. Mol. Microbiol. 95, 270-282.

  43. Hamouche, L., Laalami, S., Lakkis, G., Kobaissi, A., Chokr, A., Putzer, H., & Hamze, K. (2015) The effect of chemotaxis on the swarming ability of Bacillus subtilis : critical effect of glutamic acid and lysine. Int. J. Sci. Tec. Res. 4, 14-21. 

  44. Hotto, A. M., Castandet, B., Gilet, L., Higdon, A. Condon, C. & D.B. Stern (2015) Arabidopsis chloroplast Mini-Ribonuclease III participates in rRNA maturation and intron recycling. Plant Cell. 27, 724-740.

  45. Indrisiunaite, G., Pavlov, M. Y., Heurgué-Hamard, V., Ehrenberg, M.(2015)On the pH dependence of class-1 RF-dependent termination of mRNA translation. J. Mol. Biol. 427, 1848-1860.

  46. Joyet, P., Derkaoui, M., Bouraoui, H. & Deutscher, J. (2015) PTS-mediated regulation of the transcription activator MtlR from different organisms: surprising differences despite strong sequence conservation. J. Mol. Microbiol. Biotechnol. 25, 94-105.

  47. Mijakovic, I. & Deutscher, J.(2015)Protein-tyrosine phosphorylation in Bacillus subtilis: a ten-years retrospective. Front. Microbiol. 6, doi10.3389/fmicb.2015.00018

  48. Mora, L., Moncoq, K., England, P., Oberto, J. & de Zamaroczy, M. (2015) The stable interaction between signal-peptidase LepB of Escherichia coli and nuclease bacteriocins promotes toxin entry into the cytoplasm. J Biol Chem. 2015 Dec 25;290(52):30783-96. doi: 10.1074/jbc.M115.691907. Epub 2015 Oct 23.

  49. Plumbridge, J.(2015) Regulation of the utilization of amino sugars by E. coli and B. subtilis : same genes, different control. J. Mol Microbiol. Biotechnol. 25, 154-167.

  50. Roque, S., Cerciat, M., Gaugué, I., Mora, L., Floch, A., de Zamaroczy, M., Heurgué-Hamard, V. & Kervestin, S. (2015) Interaction between the poly(A)-binding protein Pab1 and the eukaryotic release factor eRF3 regulates translation termination but not mRNA decay in Saccharomyces cerevisiae. RNA 21, 124-134.

  51. Zébré, A., Aké, F.M.D., Ventroux, M., Noirot-Gros, M.-F., Nevry, K. R., Deutscher, J. & Milohanic, E.(2015) Interaction with EIIBMpo and phosphorylation by P~EIIBMpo exert antagonistic effects on the transcription activator ManR of Listeria monocytogenes. J. Bacteriol. 197, 1559-1572 (2015).

  52. Zorbas, C., Nicolas, E., Wacheul, L., Huvelle, E., Heurgué-Hamard, V. & Lafontaine D.L.J. (2015) The human 18S rRNA base methyltransferases DIMT1L and WBSCR22-TRMT112 but not rRNA modification are required for ribosome biogenesis. Mol. Biol. Cell. 26, 2080-2095.

  53. 2014

  54. Boudry, P., Gracia, C., Monot, M., Caillet, J., Saujet, L., Hajnsdorf, E., Dupuy, B., Martin-Verstraete, I. & Soutourina, O. (2014) Pleiotropic role of the RNA chaperone protein Hfq in the human pathogen Clostridium difficile. J. Bacteriol. 196, 3234-3248.

  55. Caillet, J., Gracia, C., Fontaine, F. & Hajnsdorf E. (2014) Clostridium difficile Hfq can replace Escherichia coli Hfq for most of its function. RNA 20, 1567-1578.

  56. Deutscher, J., Aké, F. M., Derkaoui, M., Zébré, A. C., Cao, T. N., Bouraoui, H., Kentache, T., Mokhtari, A., Milohanic, E. & Joyet, P. (2014) The bacterial phosphoenolpyruvate:carbohydrate phosphotransferase system: regulation by protein phosphorylation and phosphorylation-dependent protein-protein interactions. Microbiol. Mol. Biol. Rev. 78, 231-256.

  57. Fourati, Z., Roy, B., Millan, C., Coureux, P. D., Kervestin, S, van Tilbeurgh H. He. F., Usón, I., Jacobson, A., & Graille M. (2014) A Highly Conserved Region Essential for NMD in the Upf2 N-Terminal Domain. J. Mol. Biol. 426, 3689-36702.

  58. Gaugué I., Oberto J, Plumbridge J. (2014) Regulation of amino sugar utilisation in Bacillus subtilis by the GntR family regulators, NagR and GamR. Mol. Microbiol. 92: 100-115

  59. Hammann, P., Parmentier, D., Cerciat, M., Reimegard, J., Helfer, A. C., Boisset, S., Guillier, M., Vandenesch, F., Wagner, E. G., Romby, P. & Fechter, P. (2014) A method to map changes in bacterial surface composition induced by regulatory RNAs in Escherichia coli and Staphylococcus aureus. Biochimie 106, 175-179.

  60. Jamalli A, Hébert A., Zig L. and H. Putzer (2014). Control of expression of the ribonucleases J1 and J2 in B. subtilis. J. Bacteriol., 196, 318-324.

  61. Laalami S., Zig L. and H. Putzer (2014). Initiation of mRNA decay in bacteria. Cell Mol Life Sci. 71, 1799-1828.

  62. Létoquart, J.*, Huvelle, E.*, Wacheul, L.*, Bourgeois, G., Zorbas, C., Graille, M#., Heurgué-Hamard, V.# & Lafontaine D. L. J.# (2014) Structural and functional studies of Bud23-Trm112 reveal 18S rRNA N7-G1575 methylation occurs on late 40S precursor ribosomes. Proc. Natl. Acad. Sci. 111, E5518-E5526. *Co-first authors #Co-corresponding authors.

  63. Liu, B., Deikus, G., Bree, A., Durand, S., Kearns, D. B. & Bechhofer, D. H. (2014) Global analysis of mRNA decay intermediates in Bacillus subtilis wild type and polynucleotide phosphorylase-deletions strains. Mol Microbiol. 94, 41-55.

  64. Misra, S. K., Aké, F. M. D., Wu, Z., Milohanic, E., Cao, T. N., Cossart, P., Deutscher, J., Monnet, V., Archambaud, C. & Henry, C. (2014) Quantitative proteome analyses identify PrfA-responsive proteins and phosphoproteins in Listeria monocytogenes. J. Proteome Res., 13, 6046–6057.

  65. Mora, L. & de Zamaroczy, M. (2014) In vivo processing of DNase colicins E2 and E7 is required for their import into the cytoplasm of target cells. PloS One 9(5) : e96549.

  66. Mota, S., Vieira, N., Barbosa, S., Delaveau, T., Torchet, C., Le Saux, A., Garcia, M., Pereira, A., Lemoine, S., Coulpier, F., Darzacq, X., Benard, L., Casal, M., Devaux, F., Paiva, S. (2014) Role of the DHH1 gene in the regulation of monocarboxylic acids transporters expression in Saccharomyces cerevisiae. PLoS One 9(11):e111589.

  67. Plumbridge, J., Bossi, L., Oberto, J., Wade, J. T., & Figueroa-Bossi, N. (2014) Interplay of transcriptional and small RNA-dependent control mechanisms regulates chitosugar uptake in Escherichia coli and Salmonella. Mol. Microbiol. 92, 648-658.

  68. Senissar, M., Le Saux, A., Belgareh-Touzé, N., Adam, C.,Banroques, J. & Tanner, N.K. (2014) The DEAD-box helicase Ded1 from yeast is an mRNP cap-associated protein that shuttles between the cytoplasm and nucleus. Nucl. Acids Res. 42, 10005-22.

    2013

  69. Barhoumi, M., Meddeb-Garnaoui, A., Tanner, N. K., Banroques, J., Kaabi, B., Guizani, I. (2013) DEAD-box proteins, like Leishmania eIF4A, modulate interleukin (IL)-12, IL-10 and tumour necrosis factor-alpha production by human monocytes. Parasite Immunol. 35(5-6), 194-199. doi: 10.1111/pim.12026.

  70. Bertin-Ciftci J, Barré B, Le Pen J, Maillet L, Couriaud C, Juin P, Braun F. (2013) pRb/E2F-1-mediated caspase-dependent induction of Noxa amplifies the apoptotic effects of the Bcl-2/Bcl-xL inhibitor ABT-737. Cell Death Differ. 2013 May;20(5):755-64

  71. Bos J., Duverger Y., Thouvenot B., Chiaruttini C., Branlant C., Springer M., Charpentier B. & Barras F. (2013) The sRNA RyhB regulates the synthesis of the Escherichia coli methionine sulfoxide reductase MsrB but not MsrA, PLoS One, 8(5): e63647.

  72. Bourand, A., Yebra, M.-J., Boël, G., Mazé, A. & Deutscher, J. (2013) Ribitol utilization by Lactobacillus casei BL23 requires a mannose-type phosphotransferase system and three metabolic enzymes. J. Bacteriol. 195, 2652-2661.

  73. Bouraoui H, Ventroux M, Noirot-Gros MF, Deutscher J, Joyet P.(2013). Membrane sequestration by the EIIB domain of the mannitol permease MtlA activates the Bacillus subtilis mtl operon regulator MtlR. Mol Microbiol. 2013 Feb;87(4):789-801.

  74. Bubunenko, M., Court, D.L., Al Refaii, A., Saxena, S., Korepanov, A., Friedman, D.I., Gottesman M.E. & Alix, J.-H. (2013) Nus transcription elongation factors and RNase III modulate small ribosome subunit biogenesis in E.coli. Mol. Microbiol. 87, 382-393.

  75. Coornaert A., Chiaruttini C., Springer M. & Guillier M. (2013) Post-transcriptional control of the Escherichia coli PhoQ-PhoP two-component system by multiple sRNAs involves a novel pairing region of GcvB. PLoS Genet, 9(1):e1003156.

  76. Cournac  A,  Plumbridge J. (2013) DNA looping in prokaryotes:experimental and theoretical approaches. J. Bacteriol.  195: 1109-1119

  77. Duval, M., Korepanov, A., Fuchsbauer, O., Fechter, P., Haller, A., Fabbretti, A., Choulier, L., Micura, R., Klaholz, B. P., Romby, P., Springer, M. & Marzi, S. (2013). Escherichia coli ribosomal protein S1 unfolds structured mRNAs onto the ribosome for active translation initiation. PLoS Biol 11, e1001731.

  78. Figaro, S.*, Durand, S.*, Gilet, L., Cayet, N., Sachse, M. & Condon C. (2013) Knockouts of the genes encoding ribonucleases RNase Y and J1 are viable in B. subtilis, with major defects in cell morphology, sporulation and competence. J. Bact. 195, 2340-2348. * Co-first authors.

  79. Gaugué, I., Oberto, J., Putzer, H. & Plumbridge, J. (2013) The use of amino sugars by Bacillus subtilis : presence of a unique operon for the catabolism of glucosamine. PloS One 8(5) : e63025

  80. Iost, I., Bizebard, T., & Dreyfus, M. (2013) Functions of DEAD-box proteins in bacteria: Current knowledge and pending questions. Biochim Biophys Acta, 1829:866-877.

  81. Joyet, P., Bouraoui, H., Aké, F.M.D., Derkaoui, M., Zébré, A.C., Cao, M.T.N., Ventroux, M., Nessler, S., Noirot-Gros, M.-F., Deutscher, J. & Milohanic, E. (2013) Transcription regulators controlled by interaction wih enzyme IIB components of the phosphoenolpyruvate:sugar phosphotransferase system. Biochim. Biophys. Acta, 1834,1415-1424

  82. Laalami, S., Bessières, P., Rocca, A., Zig, L., Nicolas, P. & Putzer, H.(2013) Bacillus subtilis RNase Y activity in vivo analysed by tiling microarrays. PloS One 8(1) : e54062.

  83. Maes, A., Gracia,C.,  Bréchemier-Baey, D., Hamman, P., Chatre, E., Lemelle, L., Bertin, P. N. & Hajnsdorf, E. (2013) Role of polyadenylation in regulation of the flagella cascade and motility in E. coli. Biochimie, 95, 410-418.

  84. Mandin P. & Guillier M. (2013) Expanding control in bacteria: interplay between small RNAs and transcriptional regulators to control gene expression. Current Opinion in Microbiology 16(2), 125-132.

  85. Mokhtari, A.,Blancato, V.S., Repizo, G., Henry, C., Pikis, A.,, Bourand, A., de F. Alvarez, M., Immel, S.,Hartke, A., Thompson, J., Magni, C., Deutscher, J. (2013) Enterococcus faecalis utilizes maltose by connecting two incompatible metabolic routes via a novel maltose-6’-P phosphatase (MapP). Mol. Microbiol. 88, 234-25.

  86. Piton, J., Larue, V., Thillier, Y., Dorléans, A., Pellegrini, O., Li de la Sierra-Gallay, I., Vasseur, J. J., Debart, F., Tisné, C. & Condon, C. (2013) The B. subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates. Proc. Natl. Acad. Sci. USA, 110 8858-8863.

  87. Régnier, Ph. &  Hajnsdorf,  E. (2013) The interplay of Hfq, poly(A) polymerase I and exoribonucleases at the 3' ends of RNAs resulting from Rho-independent termination: a tentative model. RNA Biology 10(4), 602-609.

  88. Schroeter, R., Hoffman, T., Voigt, B., Meyer, H., Bleisteiner, M., Muntel, J., Jürgen B., Albrecht, D., Becher, D., Lalk, M., Evers, S., Bongaerts, J., Maurer, K., Putzer, H., Hecker, M., Schweder, T. & Bremer, E. (2013) Stress responses of the industrial workhorse Bacillus licheniformis to osmotic challenges. PloS One 8(11) : e80956

  89. 2012

  90. Bréchemier-Baey, D., Dominguez-Ramirez, L. & Plumbridge, J. (2012) The linker sequence, joining the DNA-binding domain of the homologous transcription factors, Mlc and NagC, to the reste of the protein, determines the specificity of their DNA target recognition in Escherichia coli. Mol Microbiol, 85, 1007-1019

  91. Durand, S., Gilet, L., Bessières, P., Nicolas, P. & Condon, C. (2012) Three essential ribonucleases RNase Y, J1 and III control the abundance of a majority of B. subtilis mRNAs. PLoS Genet 8(3): e1002520.

  92. Durand, S., Gilet, L. & Condon, C. (2012) The essential function of B. subtilis RNase III is to silence foreign toxin genes. PLoS Genet 8(12): e1003181.

  93. Durand, S., Jahn, N., Condon, C.* & Brantl, S.*, co-corresponding authors (2012) Type I toxin-antitoxin systems in B. subtilis. RNA Biology 9, 1491-1497.  * Co-corresponding authors.

  94. Figaro, S., Wacheul, L., Schillewaert, S., Graille, M., Huvelle, E., Mongeard, R., Zorbas, C., Lafontaine, D., & Heurgué-Hamard, V. (2012) Trm112 is required for Bud23-mediated methylation of the 18S rRNA at position G1575. Mol Cell Biol, 32, 2254-2267.

  95. Graille, M., Figaro, S., Kervestin, S., Buckingham, R. H., Liger, D., & Heurgué-Hamard, V. (2012) Methylation of class I translation termination factors: Structural and functional aspects, Biochimie, 94, 1533-1543.

  96. Hajnsdorf, E. & Boni, I. V. (2012) Multiple activities of RNA-binding proteins S1 and Hfq. Biochimie 94, 1544-1553.

  97. Kervestin, S., Li, C., Buckingham, R. H., Jacobson, A. (2012) Testing the faux-UTR model for NMD: Analysis of Upf1p and Pab1p competition for binding to eRF3/Sup35p. Biochimie 94, 1560-1571.

  98. Kervestin, S. & Jacobson, A. (2012) NMD: a multifaceted response to premature translational termination. Nat. Rev. Mol. Cell Biol. 13, 700-712.

  99. Maes, A., Gracia, C., Hajnsdorf, E. & Régnier, Ph. (2012) Search for poly(A) polymerase targets in E. coli reveals its implication in surveillance of Glu tRNA processing and degradation of stable RNAs. Mol Microbiol, 83, 436-451.

  100. Pellegrini, O., Li de la Sierra-Gallay, I., Piton, J., Gilet, L. & Condon, C. (2012) Activation of tRNA maturation by downstream uracil residues in B. subtilis. Structure, 10, 1769-1777.

  101. Sinturel, F., Bréchemier-Baey, D., Kiledjian, M., Condon, C. & Bénard, L. (2012) Activation of 5'-3' exoribonuclease Xrn1 by co-factor Dcs1 is essential for mitochondrial function in yeast. Proc. Natl. Acad. Sci. U.S.A. 109, 8264-8269.

  102. de Zamaroczy, M. & Mora, L.(2012) Hijacking cellular functions for the processing and delivery of colicins E3 and D into the cytoplasm. Biochem. Soc.  T., 40, 1486-1491.

    2011

  103. Alvarez-Añorve, L. I., Alonzo, D. A, Mora-Lugo, R., Lara-González, S., Bustos-Jaimes, I., Plumbridge, J. & Calcagno, M. L. (2011) Allosteric kinetics of the isoform 1 of human glucosamine-6-phosphate deaminase. Biochim Biophys Acta, 1814, 1846-1853.

  104. Banroques, J., Cordin, O., Doere, M., Linder, P., & Tanner, N. K. (2011) Analyses of the functional regions of DEAD-Box RNA "Helicases" with deletion and chimera constructs tested in vivo and in vitro. J Mol Biol, 413, 451-472.

  105. Braun, F., Bertin-Ciftci, J., Gallouët, A., Millour, J., Juin, Ph. (2011) Serum-nutrient starvation induces cell death mediated by Bax and Puma that is counteracted by p21 and unsmaked by Bcl-xL inhibition. PloS One 68:e23577

  106. Brill, J., Hoffman, T., Putzer, H. & Bremer, E. (2011) T-box mediated control of the anabolic proline biosynthetic genes of Bacillus subtilis. Microbiology, 157, 977-987.

  107. Bruscella, P., Shahbabian, K., Laalami, S. & Putzer, H. (2011) RNase Y is responsible for uncoupling the expression of translation factor IF3 from that of the ribosomal proteins L35 and L20 in Bacillus subtilis. Mol. Microbiol., 81, 1526-1541.

  108. Campone M., Noël, B., Couriaud, C., Grau, M., Guillemin, Y., Gautier, F., Gouraud, W., Charbonnel, C., Campion, L., Jézéquel, P., Braun, F., Barré, B., Coqueret, O., Barillé-Nion, S., & Juin, Ph. (2011) c-Myc dependent expression of proapoptotic Bim renders HER2-overexpressing breast cancer cell dependent on antiapoptotic Mcl-1. Mol Cancer. 10:110.

  109. Chauleau, M., Mora, L., Serba, J. & de Zamaroczy, M. (2011) FtsH-dependent processing of RNase colicins D and E3 means that only the cytotoxic domains are imported into the cytoplasm. J. Biol. Chem. 286, 29397-29407.

  110. Condon, C. & Bechhofer, D. (2011) Regulated RNA stability in Gram positives. Curr. Opin. Microbiol. 14, 148-54.

  111. Dorléans, A., Li de la Sierra Gallay, I., Piton, J., Zig, L., Gilet, L., Putzer, H. & Condon, C. (2011) Molecular basis for the recognition and cleavage of RNA by the bifunctional 5'-3' exo/endoribonuclease RNase J. Structure 19, 1252-1261.

  112. Dreyfus, M. & Heurgué-Hamard, V. (2011) Termination troubles in Escherichia coli K12. Mol. Microbiol. 79, 288-291.

  113. Hamze, K., Autret, S., Hinc, K., Laalami, S., Julkowska, D., Briandet, R., Renault, M., Absalon, C., Holland I. B., Putzer H. & Séror, S. J. (2011) Single-cell analysis in situ in a Bacillus subtilis swarming community identifies distinct spatially separated subpopulations differentially expressing hag (flagellin), including specialized swarmers. Microbiology 157, 2456-2469.

  114. Laalami, S. & Putzer, H. (2011) mRNA degradation and maturation in prokaryotes : the global players. Biomolecular Concepts 2, 491-506.

  115. Liger, D.*, Mora, L.*, Lazar, N., Figaro, S., Henri, J., Scrima, N., Buckingham R. H., van Tilbeurgh, H., Heurgué-Hamard, V.# & Graille, M# (2011) Mechanism of activation of methyltransferases involved in translation by the Trm112 "hub" protein.  Nucleic Acids Res. 39, 6249-6259. * Co-first authors # Co-corresponding authors

  116. Mangeol, P., Bizebard, T., Chiaruttini, C., Dreyfus, M., Springer, M., & Bockelmann, U. (2011) Probing ribosomal protein–RNA interactions with an external force. Proc. Natl. Acad. Sci. U.S.A. 108, 18272-18276.

  117. Marchais, A., Duperrier, S., Durand, S., Gautheret, D. & Stragier, P. (2011) CsfG, a sporulation-specific, small non-coding RNA highly conserved in endospore formers. RNA Biol. 8, 358-364.

  118. McVicker, G., Sun, L., Sohanpal, B. K., Gashi, K., Williamson, R. A., Plumbridge, J., & Blomfield, I. C. (2011) SlyA activates fimB expression and type 1 fimbriation in Escherichia coli K-12. J. Biol. Chem. 286, 32026-32035.

  119. Proux, F., Dreyfus, M., Iost, II (2011) Identification of the sites of action of SrmB, a DEAD-box RNA helicase involved in Escherichia coli ribosome assembly. Mol Microbiol, 82, 300-311.

  120. René, O. & Alix, J.-H. (2011) Late steps of ribosome assembly in E.coli are sensitive to a severe heat stress but are assisted by the HSP70 chaperone machine. Nucl. Acids Res, 39, 1855-1867.

  121. Richards, J., Liu, Q., Pellegrini, O., Celesnik, H., Yao, S., Bechhofer, D. H, Condon, C. & Belasco, J. G. (2011) An RNA pyrophosphohydrolase triggers 5’-exonucleolytic degradation of mRNA in Bacillus subtilis. Mol Cell, 43, 940-949.

  122. Taverniti, V., Forti, F., Ghisotti, D. & Putzer, H. (2011). Mycobacterium smegmatis RNase J is a 5’-3’ exo-/endoribonuclease and both RNase J and RNase E are involved in ribosomal RNA maturation. Mol. Microbiol. 82, 1260-1276.

  123. 2010

  124. Banroques, J., Doere, M., Dreyfus, M., Linder, P., & Tanner, N. K. (2010) Motif III in Superfamily 2 "Helicases" Helps Convert the Binding Energy of ATP into a High-Affinity RNA Binding Site in the Yeast DEAD-Box Protein Ded1. J. Mol. Biol. 396, 949-966.

  125. Busi, F., Le Dérout, J., Cerciat, M., Régnier, Ph. & Hajnsdorf, E. (2010) Is the secondary putative RNA-RNA interaction site relevant to GcvB mediated regulation of oppA mRNA in Escherichia coli ? Biochimie 92, 1458-1461.

  126. Cartier, G., Lorieux, F., Allemand, F., Dreyfus, M. & Bizebard, T. (2010) Cold adaptation in DEAD-box proteins. Biochemistry, 49, 2636-2646.

  127. Condon, C. (2010) What is the role of RNase J in mRNA decay ? RNA Biology 7, 316-321.

  128. Coornaert, A., Lu. A., Mandin, P., Springer, M., Gottesman, S. & Guillier, M. (2010) MicA sRNA links the PhoP regulon to cell envelope stress. Mol. Microbiol., 76, 467-479.

  129. Le Dérout, J., Boni, I. V., Régnier, Ph. & Hajnsdorf, E. (2010) Hfq affects mRNA levels independently of degradation. BMC Mol. Biol. 11, 17.

  130. Mathy, N., Hebert, A., Mervelet, P., Bénard, L., Dorléans, A., Li de la Sierra-Gallay, I., Noirot, P., Putzer, H. & Condon, C. (2010) Bacillus subtilis ribonucleases J1 and J2 form a complex with altered enzyme behaviour. Mol. Microbiol. 75, 489-498.

  131. Pennetier, C., Oberto, J. & Plumbridge, J. (2010) An antisense transcript from within the ptsG promoter region in Escherichia coli. J. Mol. Microbiol. Biotechnol., 18, 230-240.

  132. Redko, Y. & Condon, C. (2010) Maturation of 23S rRNA in Bacillus subtilis in the Absence of Mini-III. J. Bacteriol. 192, 356-359.

  133. Traag, B. A., Driks, A., Stragier, P., Bitter, W., Broussard, G., Hatfull, G., Chu, F., Adams, K. N., Ramakrishnan, L. & Losick, R. (2010) Do mycobacteria produce endospores ? Proc. Natl. Acad. Sci. USA, 107, 878-881.

  134. 2009

  135. Al Refaii, A. & Alix, J.-H. (2009) Ribosome biogenesis is temperature-dependent and delayed in Escherichia coli lacking the chaperone DnaK or DnaJ. Mol. Microbiol. 71, 748-762.

  136. Álvarez-Añorve, L., Bustos-Jaimes, I., Calcagno, M., & Plumbridge, J. (2009) Allosteric regulation of glucosamine-6-phosphate deaminase (NagB) and growth of Escherichia coli on glucosamine. J. Bacteriol. 191, 6401-6407.

  137. Andrade, J. M., Hajnsdorf, E., Régnier, Ph. & Arraiano, C. (2009) The Poly(A)-dependent degradation pathway of rpsO mRNA is primarily mediated by RNase R. RNA 15, 316-326.

  138. Busi, F., Cayrol, B., Lavelle, C., Le Dérout, J., Pietrement, O., Le Cam, E., Geinguenaud, F., Lacoste, J., Régnier, Ph., Arluison, V. (2009) Auto-assembly as a new regulatory mechanism of noncoding RNA. Cell Cycle 8, 952-954.

  139. Cayrol, B., Geinguenaud, F., Lacoste, J., Busi, F., Le Dérout, J., Pietrement, O., Le Cam, E., Régnier, Ph., Lavelle, C & Arluison, V. (2009) Auto-assembly of E. coli DsrA small non coding RNA : molecular characteristics and functional consequences. RNA Biology 6, 434-445.

  140. Chiaruttini, C., Allemand, F. & Springer, M. (2009) Structural probing of RNA thermosensors. Methods Mol. Biol. 540, 233-245.

  141. Daou-Chabo, R., Mathy, N., Bénard, L. & Condon, C. (2009) Ribosome initiating translation of the hbs mRNA protect it from 5’-to-3’ exoribonucleolytic degradation by RNase J1. Mol. Microbiol. 71, 1538-1550.

  142. Daou-Chabo, R. & Condon, C. (2009) RNase J1 endonuclease activity as a probe of RNA secondary structure. RNA 15, 1417-1425.

  143. Diago-Navarro, E., Mora, L., Buckingham, R. H., Diaz-Orejas, R. & Lemonnier, M. (2009) Novel E.coli RF1 mutants with decreased translation termination activity and increased sensitivity to the cytotoxic effect of the bacterial toxins Kid and RelE. Mol. Microbiol. 71, 66-78.

  144. El Qaidi, S., Allemand, F., Oberto, J. & Plumbridge, J. (2009) Repression of galP, the galactose transporter in Escherichia coli, requires the specific regulator of N-acetylglucosamine metabolism. Mol. Microbiol. 71, 146-157.

  145. Fang, M., Zeisberg, W-M., Condon, C., Ogryzko, V., Danchin, A. & Mechold, U. (2009) Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis. Nucleic Acids Res. 37, 5114-5125.

  146. Oberto, J., Nabti, S., Jooste, V., Mignot, H. & Rouvière-Yaniv, J. (2009) The HU regulon is composed of genes responding to anaerobiosis, acid stress, high osmolarity and SOS induction. PLoS One 4, e4367.

  147. Plumbridge, J. (2009) An alternative route for recycling of N-acetylglucosamine from peptidoglycan involves the N-acetylglucosamine phosphotransferase system in E. coli. J. Bacteriol. 191, 5641-5647.

  148. Redko, Y. & Condon, C. (2009) Ribosomal protein L3 bound to 23S rRNA stimulates its maturation by Mini-III ribonuclease. Mol. Microbiol. 71, 1145-1154.

  149. Rhayat, L., Duperrier, S., Carballido-Lopez, R., Pellegrini, O. & Stragier, P. (2009) Genetic dissection of an inhibitor of the sporulation sigma factor sG. J. Mol. Biol. 390, 835-844.

  150. Shahbabian, K., Jamalli, A., Zig, L. & Putzer, H.(2009). RNase Y, a novel endoribonuclease, initiates riboswitch turnover in B. subtilis. EMBO J. 28, 3523-3533.

  151. Sinturel, F., Pellegrini, O., Xiang, S., Tong, L., Condon, C. & Bénard, L. (2009) Real time fluorescence detection of exoribonucleases. RNA 15, 2057-2062.

  152. Timsit, Y., Acosta, Z., Allemand, F., Chiaruttini, C. & Springer, M. (2009) The role of disordered ribosomal protein extensions in the early steps of eubacterial 50 s ribosomal subunit assembly. Int. J. Mol. Sci. 10, 817-834.

  153. Trubetskoy D., Proux F., Allemand F., Dreyfus M. & Iost I. (2009) SrmB, a DEAD-box helicase involved in Escherichia coli ribosome assembly, is specifically targeted to 23S rRNA in vivo. Nucleic Acids Res. 37, 6540-6549.

  154. 2008

  155. André, G., Even, S., Putzer, H., Burguière, P., Croux, C., Danchin, A., Martin-Verstraete, I. & Soutourina, O. (2008) S-box and T-box riboswitches and antisense RNA control a sulphur metabolic operon of Clostridium acetobutylicum. Nucleic Acids Res. 36, 5955-5969.

  156. Bouvier, J., Stragier, P., Morales, V., Rémy, E., and Gutierrez, C. (2008) Lysine represses transcription of the Escherichia coli dapB gene by preventing its activation by the ArgP activator. J. Bacteriol. 190, 5224-5229.

  157. Chodavarapu, S., Felczak, M.M., Rouvière-Yaniv, J. & Kaguni, J.M. (2008) Escherichia coli DnaA interacts with HU in initiation at the E-coli replication origin. Mol. Microbiol. 67, 781-792.

  158. Deikus, G., Condon, C. & Bechhofer, D. H. (2008) Role of Bacillus subtilis RNase J1 endonuclease and 5’-exonuclease activities in trp leader mRNA turnover. J. Biol. Chem. 283, 17158-17167.

  159. El Qaidi, S. & Plumbridge, J. (2008) Switching control of expression of ptsG from the Mlc regulon to the NagC regulon. J. Bacteriol. 190, 4677-4686. Err 190, 5733.

  160. Figaro, S., Scrima, N., Buckingham, R. H. & Heurgué-Hamard, V. (2008) HemK2 protein, encoded on human chromosome 21, methylates translation termination factor eRF1. FEBS Letters 582, 2352-2356.

  161. Haentjens-Sitri, J., Allemand, F., Springer, M. & Chiaruttini, C. (2008) A competition mechanism regulates the translation of the Escherichia coli operon encoding ribosomal proteins L35 and L20. J. Mol. Biol. 375, 612-625.

  162. Kamashev, D., Balandina, A., Mazur, A.K., Arimondo, P. B. & Rouviere-Yaniv, J. (2008) HU binds and folds single-stranded DNA. Nucleic Acids Res. 36, 1026-1036.

  163. Karmazyn-Campelli, C., Rhayat, L., Carballido-López, R., Duperrier, S., Frandsen, N. & Stragier, P. (2008) How the early sporulation sigma factor sF delays the switch to late development in Bacillus subtilis. Mol. Microbiol. 67, 1169-1180.

  164. Li de la Sierra-Gallay, I., Zig, L., Jamalli, A. & Putzer, H. (2008) Structural insights into the dual activity of RNase. Nat. Struct. Mol. Biol. 15, 206-212.

  165. Mäder, U., Zig, L., Kretschmer, J., Homuth, G. & Putzer, H. (2008) mRNA processing by RNases J1 and J2 affects Bacillus subtilis gene expression on a global scale. Mol. Microbiol. 70, 183-196.

  166. Mora, L., Klepsch, M., Buckingham, R. H., Heurgué-Hamard, V., Kervestin, S. & de Zamaroczy, M. (2008) Dual roles of the central domain of colicin D tRNAse in TonB-mediated import and immunity. J. Biol. Chem. 283, 4993-5003.

  167. Pennetier, C., Dominguez-Ramirez, L. & Plumbridge, J. (2008) Different regions of Mlc and NagC, homologous transcriptional repressors controlling expression of glucose and N-acetylglucosamine phosphotransferase systems in Escherichia coli, are required for inducer signal recognition. Mol. Microbiol. 67, 364-377.

  168. Redko, Y., Bechhofer,  D. H. & Condon, C. (2008) Mini-III, an ususual member of the RNase III family of enzymes, catalyses 23S ribosomal RNA maturation in B. subtilis. Mol. Microbiol. 68, 1096-1106.

  169. Reichenbach, B., Maes, A., Kalamorz, F., Hajnsdorf, E. & Görke, B. (2008) The small RNA GlmY acts upstream of the sRNA GlmZ in the activation of glmS expression and is subject to regulation by polyadenylation in Escherichia coli. Nucleic Acids Res. 36, 2570–2580.

  170. Roovers, M., Oudjama, Y., Kaminska, K. H., Purta, E., Caillet, J., Droogmans, L. & Bujnicki, J. M. (2008) Sequence-structure-function analysis of the bifunctional enzyme MnmC that catalyses the last two steps in the biosynthesis of hypermodified nucleoside mnm5s2U in tRNA. Proteins 71, 2076-2085.

  171. Seguin, J., Mayer, C., Robert, B. & Arluison, V. (2008) Thermodynamics of the b2 association in the light-harvesting complex I of Rhodospirillum rubrum. Implication of peptide identity in dimmer stability. FEBS J. 275, 1240-1247.

  172. Servant, G., Pennetier, C. & Lesage P. (2008) Remodeling yeast gene transcription by activating the Ty1 long terminal repeat retrotransposon under severe adenine deficiency. Mol. Cell. Biol., 28, 5543-5554.

    2007

  173. Allemand, F., Haentjens, J., Chiaruttini, C., Royer, C. & Springer, M. (2007) Escherichia coli ribosomal protein L20 binds as a single monomer to its own mRNA bearing two potential binding sites. Nucleic Acids Res. 35, 3016-3031.

  174. Arluison, V., Hohng, S., Roy, R., Pellegrini, O., Régnier, Ph. & Ha, T. (2007) Spectroscopic observation of RNA chaperone activities of Hfq in post-transcriptional regulation by a small non-coding RNA. Nucleic Acids Res. 35, 999-1006.

  175. Arluison, V., Mutyam, S, Mura, C, Marco, S, Sukhodolets M (2007) Sm-like protein Hfq: location of the ATP-binding site and the effect of ATP on Hfq-RNA complexes, Protein Science 16, 1830-1841.

  176. Britton, R. A., Wen, T., Schaefer, L., Pellegrini, O., Uicker, W. C., Mathy, N., Tobin, C., Daou, R., Szyk, J. & Condon, C. (2007) Maturation of the 5'-end of Bacillus subtilis 16S rRNA by the essential ribonuclease YkqC/RNase J1. Mol. Microbiol. 63, 127-138.

  177. Caillet, J., Graffe, M., Eyermann, F., Romby, P. & Springer, M. (2007) Mutations in residues involved in zinc binding in the catalytic site of Escherichia coli threonyl-tRNA synthetase confer a dominant lethal phenotype. J. Bacteriol. 189, 6839-6848.

  178. Choonee, N., Even, S., Zig, L. & Putzer, H. (2007) Ribosomal protein L20 controls expression of the Bacillus subtilis infC operon via a transcription attenuation mechanism. Nucleic Acids Res. 35, 1578-1588.

  179. Condon, C. (2007) Maturation and degradation of RNA in bacteria. Curr. Opin. Microbiol. 10, 271-278.

  180. Joanny, G., Le Derout, J., Bréchemier-Bae, D., Labas, V., Vinh, J., Régnier, Ph. & Hajnsdorf, E. (2007) Polyadenylation of a functional mRNA controls gene expression in E. coli. Nucleic Acids Res. 35, 2494-2502.

  181. Mathy, N., Bénard, L., Pellegrini, O., Daou, R., Wen, T. & Condon, C.(2007) 5’-to-3’ exoribonuclease activity in bacteria : role of RNase J1 in rRNA maturation and 5’ stability of mRNA. Cell 129, 681-692.

  182. Mora, L., Heurgué-Hamard, V., de Zamaroczy, M., Kervestin, S. & Buckingham, R.H. (2007) Methylation of bacterial release factors RF1 and RF2 is required for normal translation termination in vivo. J. Biol. Chem. 282, 35638-35645.

  183. Redko, Y., Li de la Sierra-Gallay, I. & Condon, C.(2007) When all’s zed and done : the structure and function of RNase Z in prokaryotes. Nat. Rev. Microbiol. 5, 278-286.

  184. Scheibe, M., Bonin, S., Hajnsdorf, E., Betat, H. & Morl, M. (2007) Hfq stimulates the activity of the CCA-adding enzyme. BMC Molecular Biology 8, 92.

  185. Sohanpal, B. K., Friar, S., Roobol, J., Plumbridge, J. & Blomfield, I. C.  (2007) Multiple co-regulatory elements and IHF are necessary for the control of fimB expression in response to sialic acid and N-acetylglucosamine in E.coli K-12. Mol. Microbiol. 63, 1223-1236.

  186. Zeller, M. E., Csanadi, A., Miczak, A., Rose, T., Bizebard, T. & Kaberdin, V. R. (2007) Quaternary structure and biochemical properties of mycobacterial RNase E/G. Biochem. J. 403, 207-215.






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